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Drosophila gene expression annotation

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Stock report for CPTI-001277 Click on the arrows to expand the information panels

Element name:	CPTI-001277	Derived from:	none	Line ID:	1
Donor:	681-1 TM3 (Males)	Construct:	PIGP3{FSVS-1}	Lethality:	homozygous lethal
YFP expression?	Yes	Balancer:	SM6a	Chromosome:	2
Eye colour:	yellow	COPAS exp no.	157	COPAS plate	1:A3
Sent?	Yes (batch 6)	Stock status?	Kept	Seq plate:	147 148

Notes:

Sequencing Information

Scaffold:	574742	Map location:	21E2	Chromosome:	2L
End mapped:	5	Element orientation:	minus	YFP orientation:	plus

Gene insertions

Gene ID	Gene Name	Start	Stop	Strand	Chr	GO Terms	Links
CG2813	CG2813	574513	575746	1	2L	info

Transcript and frame information

Transcript ID	Feature	Feature ID	Correct orient?	In a UTR?	Correct frame?
CG2813-RA	intron	intron_CG2813:1_CG2813:2	Yes	No	Yes

Scaffold:	574737	Map location:	21E2	Chromosome:	2L
End mapped:	3	Element orientation:	minus	YFP orientation:	plus

Gene insertions

Gene ID	Gene Name	Start	Stop	Strand	Chr	GO Terms	Links
CG2813	CG2813	574513	575746	1	2L	info

Transcript and frame information

Transcript ID	Feature	Feature ID	Correct orient?	In a UTR?	Correct frame?
CG2813-RA	intron	intron_CG2813:1_CG2813:2	Yes	No	Yes

Scaffold:	574742	Map location:	21E2	Chromosome:	2L
End mapped:	5	Element orientation:	minus	YFP orientation:	plus

Gene insertions

Gene ID	Gene Name	Start	Stop	Strand	Chr	GO Terms	Links
CG2813	CG2813	574513	575746	1	2L	info

Transcript and frame information

Transcript ID	Feature	Feature ID	Correct orient?	In a UTR?	Correct frame?
CG2813-RA	intron	intron_CG2813:1_CG2813:2	Yes	No	Yes

Scaffold:	574737	Map location:	21E2	Chromosome:	2L
End mapped:	3	Element orientation:	minus	YFP orientation:	plus

Gene insertions

Gene ID	Gene Name	Start	Stop	Strand	Chr	GO Terms	Links
CG2813	CG2813	574513	575746	1	2L	info

Transcript and frame information

Transcript ID	Feature	Feature ID	Correct orient?	In a UTR?	Correct frame?
CG2813-RA	intron	intron_CG2813:1_CG2813:2	Yes	No	Yes

Interaction data

STREPII

FLAG

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All annotation data

Expression reports

Stage	Tissue type	Annotator	ImagesCompare images Merge images	Annotation
embryonic stage 5	whole organism (Live or non-fixed prep)	Sanson Lab: Sanson Lab		whole organism cytoplasm apical
embryonic stage 11	whole organism (Live or non-fixed prep)	Sanson Lab: Sanson Lab		whole organism ubiquitous
embryonic stage 12	whole organism (Live or non-fixed prep)	Bloor Lab: James Bloor		amnioserosa endoplasmic reticulum embryonic epidermis endoplasmic reticulum
first instar larval stage	larval muscle system (Live or non-fixed prep)	Brown lab: Sven Huelsmann		larval epidermis
third instar larval stage	whole organism (Live or non-fixed prep)	Roberts Lab: Roger Guy Phillips		dorsal mesothoracic disc eye disc dorsal metathoracic disc antennal disc larval fat body larval salivary gland cytoplasm ventral thoracic disc
third instar larval stage	whole organism (Live or non-fixed prep)	Gould Lab: Alex Gould		imaginal disc
third instar larval stage	larval salivary gland (Live or non-fixed prep)	Cambridge Genetics: Rob White		larval salivary gland cytoplasm
adult stage	male reproductive system (Live or non-fixed prep)	White-Cooper Lab: Helen White-Cooper		ejaculatory duct cytoplasm male accessory gland main cell cytoplasm seminal vesicle cytoplasm cyst cell cytoplasm hub cell cytoplasm
adult stage	adult brain (Fixed tissue prep)	Armstrong Lab: Seymour Knowles-Barley		cerebral cortex
adult stage	whole organism (Live or non-fixed prep)	Kyriacou & Rosato Labs: Renata Azevedo & Celia Hansen
late embryonic stage	whole organism (Live or non-fixed prep)	Sanson Lab: Sanson Lab		whole organism ubiquitous NOT uniform epidermis tracheal system

No expression reports

Stage	Tissue type	Annotator
first instar larval stage	larval circulatory system (Live or non-fixed prep)	Stephen Brown
second instar larval stage	larval circulatory system (Live or non-fixed prep)	Stephen Brown
third instar larval stage	larval circulatory system (Live or non-fixed prep)	Stephen Brown
third instar larval stage	imaginal precursor (Live or non-fixed prep)	David Gubb
third instar larval stage	larval central nervous system (Live or non-fixed prep)	Andrea Brand
adult stage	female reproductive system (Live or non-fixed prep)	Lucy and Chin-wen
adult stage	whole organism (Live or non-fixed prep)	Hanneke Okkenhaug
adult stage	whole organism (Live or non-fixed prep)	David Huen

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