Drosophila
gene expression annotation
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Stock report for CPTI-001409
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Stock report
Element name:
CPTI-001409
Derived from:
none
Line ID:
1
Donor:
681-4 TM3 (Males)
Construct:
PIGP3{FSVS-1}
Lethality:
viable
YFP expression?
Yes
Balancer:
SM6a
Chromosome:
2
Eye colour:
yellow
COPAS exp no.
210
COPAS plate
1:B1
Sent?
Yes (batch 7)
Stock status?
Kept
Seq plate:
148
Notes:
Sequencing Information
Scaffold:
6674019
Map location:
26F6
Chromosome:
2L
End mapped:
5
Element orientation:
minus
YFP orientation:
plus
Gene insertions
Gene ID
Gene Name
Start
Stop
Strand
Chr
GO Terms
Links
CG11181
cup
6663965
6674790
1
2L
info
CG34310
CG34310
6673963
6674525
1
2L
info
Transcript and frame information
Transcript ID
Feature
Feature ID
Correct orient?
In a UTR?
Correct frame?
CG11181-RA
intron
intron_FBgn0000392:5_FBgn0000392:6
Yes
No
Yes
CG34310-RA
exon
FBgn0085339:1
CG34310-RA
5_UTR
five_prime_UTR_FBgn0085339:1_781
CG34310-RB
exon
FBgn0085339:1
CG34310-RB
5_UTR
five_prime_UTR_FBgn0085339:1_782
Scaffold:
6674014
Map location:
26F6
Chromosome:
2L
End mapped:
3
Element orientation:
minus
YFP orientation:
plus
Gene insertions
Gene ID
Gene Name
Start
Stop
Strand
Chr
GO Terms
Links
CG11181
cup
6663965
6674790
1
2L
info
CG34310
CG34310
6673963
6674525
1
2L
info
Transcript and frame information
Transcript ID
Feature
Feature ID
Correct orient?
In a UTR?
Correct frame?
CG11181-RA
intron
intron_FBgn0000392:5_FBgn0000392:6
Yes
No
Yes
CG34310-RA
exon
FBgn0085339:1
CG34310-RA
5_UTR
five_prime_UTR_FBgn0085339:1_781
CG34310-RB
exon
FBgn0085339:1
CG34310-RB
5_UTR
five_prime_UTR_FBgn0085339:1_782
Sorting data
File:
2007_07_27_1409_sort_sw.jpg
Sorted:
266 / 1088 (24.45 %)
All annotation data
Expression reports
Stage
Tissue type
Annotator
Images
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Annotation
embryonic stage 5
whole organism
(Live or non-fixed prep)
Sanson Lab: Sanson Lab
whole organism
cytoplasm
embryonic stage 11
whole organism
(Live or non-fixed prep)
Sanson Lab: Sanson Lab
whole organism
ubiquitous
first instar larval stage
larval muscle system
(Live or non-fixed prep)
Brown lab: Sven Huelsmann
larval epidermis
cytoplasm
larval somatic muscle
cytoplasm
third instar larval stage
whole organism
(Live or non-fixed prep)
Roberts Lab: Roger Guy Phillips
antennal disc
eye disc
larval brain
ventral thoracic disc
larval ventral ganglion
dorsal mesothoracic disc
uniform
adult stage
male reproductive system
(Live or non-fixed prep)
White-Cooper Lab: Helen White-Cooper
male germline stem cell
cytoplasm
spermatogonium
cytoplasm
primary spermatocyte
cytoplasm
secondary spermatocyte
mitochondrion
onion stage spermatid
mitochondrion
Nebenkern
Nebenkern derivative
elongation stage spermatid
waste bag
adult stage
female reproductive system
(Live or non-fixed prep)
St Johnston Lab: Nick Lowe
oocyte
cytoplasm
granular
posterior
anterior
restricted
nurse cell
cytoplasm
granular
germarium
cytoplasm
granular
adult stage
adult brain
(Fixed tissue prep)
Armstrong Lab: Seymour Knowles-Barley
cerebral cortex
adult brain
late embryonic stage
whole organism
(Live or non-fixed prep)
Sanson Lab: Sanson Lab
whole organism
ubiquitous
No expression reports
Stage
Tissue type
Annotator
embryonic stage 12
embryonic integumentary system
(Live or non-fixed prep)
James Bloor
embryonic stage 13
embryonic integumentary system
(Live or non-fixed prep)
James Bloor
embryonic stage 14
embryonic integumentary system
(Live or non-fixed prep)
James Bloor
embryonic stage 15
embryonic integumentary system
(Live or non-fixed prep)
James Bloor
third instar larval stage
imaginal precursor
(Live or non-fixed prep)
David Gubb
third instar larval stage
central nervous system
(Live or non-fixed prep)
Andrea Brand
third instar larval stage
larval circulatory system
(Live or non-fixed prep)
Ana Maria Valles
third instar larval stage
larval salivary gland
(Live or non-fixed prep)
Rob White
adult stage
whole organism
(Live or non-fixed prep)
David Huen
adult stage
whole organism
(Live or non-fixed prep)
Hanneke Okkenhaug
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