Drosophila
gene expression annotation
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Stock report for CPTI-001516
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Stock report
Element name:
CPTI-001516
Derived from:
none
Line ID:
1
Donor:
681-4 TM3 (Males)
Construct:
PIGP3{FSVS-1}
Lethality:
viable
YFP expression?
Yes
Balancer:
SM6a
Chromosome:
2
Eye colour:
yellow
COPAS exp no.
219
COPAS plate
1:C3
Sent?
Yes (batch 8)
Stock status?
Kept
Seq plate:
149
Notes:
Sequencing Information
Scaffold:
9071514
Map location:
49F7
Chromosome:
2R
End mapped:
5
Element orientation:
plus
YFP orientation:
minus
Gene insertions
Gene ID
Gene Name
Start
Stop
Strand
Chr
GO Terms
Links
CG17724
CG17724
9063597
9073317
-1
2R
info
CG32904
seq
9067187
9077579
-1
2R
info
Transcript and frame information
Transcript ID
Feature
Feature ID
Correct orient?
In a UTR?
Correct frame?
CG17724-RA
intron
intron_CG17724:2_CG17724:3
Yes
Yes
-
-
CG32904-RA
intron
intron_CG32904:2_CG32904:3
Yes
No
Yes
Scaffold:
9071519
Map location:
49F7
Chromosome:
2R
End mapped:
3
Element orientation:
plus
YFP orientation:
minus
Gene insertions
Gene ID
Gene Name
Start
Stop
Strand
Chr
GO Terms
Links
CG17724
CG17724
9063597
9073317
-1
2R
info
CG32904
seq
9067187
9077579
-1
2R
info
Transcript and frame information
Transcript ID
Feature
Feature ID
Correct orient?
In a UTR?
Correct frame?
CG17724-RA
intron
intron_CG17724:2_CG17724:3
Yes
Yes
-
-
CG32904-RA
intron
intron_CG32904:2_CG32904:3
Yes
No
Yes
Sorting data
File:
2007_08_22_1516_sort_sw.jpg
Sorted:
697 / 1030 (67.67 %)
Interaction data
35
68
16
STREPII
FLAG
•
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Tag results
All annotation data
Expression reports
Stage
Tissue type
Annotator
Images
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Annotation
embryonic stage 5
whole organism
(Live or non-fixed prep)
Sanson Lab: Sanson Lab
whole organism
nucleus
embryonic stage 11
whole organism
(Live or non-fixed prep)
Sanson Lab: Sanson Lab
whole organism
segmentally repeated
first instar larval stage
larval muscle system
(Live or non-fixed prep)
Brown lab: Sven Huelsmann
larval somatic muscle
cytoplasm
nucleus
third instar larval stage
whole organism
(Live or non-fixed prep)
Gould Lab: Alex Gould
eye-antennal disc
larval central nervous system
third instar larval stage
whole organism
(Live or non-fixed prep)
Roberts Lab: Roger Guy Phillips
third instar larval stage
larval central nervous system
(Live or non-fixed prep)
Brand Lab: Andrea Brand
larval central nervous system
larval brain
nucleus
ubiquitous
larval ventral ganglion
subset
lateral
third instar larval stage
larval salivary gland
(Live or non-fixed prep)
Cambridge Genetics: Rob White
larval salivary gland
nucleus
cytoplasm
plasma membrane
adult stage
male reproductive system
(Live or non-fixed prep)
White-Cooper Lab: Helen White-Cooper
male germline stem cell
nucleus
primary spermatocyte
nucleus
spermatogonium
nucleus
cyst cell
nucleus
adult stage
adult brain
(Fixed tissue prep)
Armstrong Lab: Seymour Knowles-Barley
cerebral cortex
adult stage
female reproductive system
(Live or non-fixed prep)
St Johnston Lab: Celia and Antonio
oocyte
nucleus
nurse cell
nucleus
dorsal closure stage
central nervous system
(Live or non-fixed prep)
Tear Lab: Guy Tear
late embryonic stage
whole organism
(Live or non-fixed prep)
Sanson Lab: Sanson Lab
whole organism
ubiquitous
central nervous system
No expression reports
Stage
Tissue type
Annotator
third instar larval stage
larval circulatory system
(Live or non-fixed prep)
Ana Maria Valles
adult stage
whole organism
(Live or non-fixed prep)
Hanneke Okkenhaug
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