stock report

Drosophila gene expression annotation

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Stock report for CPTI-002118 Click on the arrows to expand the information panels

Element name:	CPTI-002118	Derived from:	none	Line ID:	1
Donor:	544 KH3.22a (Males)	Construct:	PBac{SVS-1}	Lethality:	homozygous lethal
YFP expression?	Yes	Balancer:	SM6a	Chromosome:	2
Eye colour:	yellow	COPAS exp no.	263	COPAS plate	1:C4
Sent?	Yes (batch 9)	Stock status?	Kept	Seq plate:	152 153 154

Notes:

Sequencing Information

Scaffold:	18858675	Map location:	37B1	Chromosome:	2L
End mapped:	5	Element orientation:	plus	YFP orientation:	minus

Gene insertions

Gene ID	Gene Name	Start	Stop	Strand	Chr	GO Terms	Links
CG10602	CG10602	18855124	18859212	-1	2L	info
CG10603	mRpL13	18858023	18859190	-1	2L	info

Transcript and frame information

Transcript ID	Feature	Feature ID	Correct orient?	In a UTR?	Correct frame?
CG10602-RA	intron	intron_CG10602:9_CG10602:2	Yes	No	Yes
CG10603-RA	intron	intron_CG10603:2_CG10603:3	Yes	No	Yes

Scaffold:	18858679	Map location:	37B1	Chromosome:	2L
End mapped:	3	Element orientation:	plus	YFP orientation:	minus

Gene insertions

Gene ID	Gene Name	Start	Stop	Strand	Chr	GO Terms	Links
CG10602	CG10602	18855124	18859212	-1	2L	info
CG10603	mRpL13	18858023	18859190	-1	2L	info

Transcript and frame information

Transcript ID	Feature	Feature ID	Correct orient?	In a UTR?	Correct frame?
CG10602-RA	intron	intron_CG10602:9_CG10602:2	Yes	No	Yes
CG10603-RA	intron	intron_CG10603:2_CG10603:3	Yes	No	Yes

Scaffold:	18858675	Map location:	37B1	Chromosome:	2L
End mapped:	5	Element orientation:	plus	YFP orientation:	minus

Gene insertions

Gene ID	Gene Name	Start	Stop	Strand	Chr	GO Terms	Links
CG10602	CG10602	18855124	18859212	-1	2L	info
CG10603	mRpL13	18858023	18859190	-1	2L	info

Transcript and frame information

Transcript ID	Feature	Feature ID	Correct orient?	In a UTR?	Correct frame?
CG10602-RA	intron	intron_CG10602:9_CG10602:2	Yes	No	Yes
CG10603-RA	intron	intron_CG10603:2_CG10603:3	Yes	No	Yes

Scaffold:	18858675	Map location:	37B1	Chromosome:	2L
End mapped:	5	Element orientation:	plus	YFP orientation:	minus

Gene insertions

Gene ID	Gene Name	Start	Stop	Strand	Chr	GO Terms	Links
CG10602	CG10602	18855124	18859212	-1	2L	info
CG10603	mRpL13	18858023	18859190	-1	2L	info

Transcript and frame information

Transcript ID	Feature	Feature ID	Correct orient?	In a UTR?	Correct frame?
CG10602-RA	intron	intron_CG10602:9_CG10602:2	Yes	No	Yes
CG10603-RA	intron	intron_CG10603:2_CG10603:3	Yes	No	Yes

File: 2007_12_14_2118_sort_sw.jpg
Sorted: 146 / 393 (37.15 %)

Interaction data

STREPII

FLAG

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All annotation data

Expression reports

Stage	Tissue type	Annotator	ImagesCompare images Merge images	Annotation
embryonic stage 5	whole organism (Live or non-fixed prep)	Sanson Lab: Sanson Lab		whole organism cytoplasm apical punctate
embryonic stage 11	whole organism (Live or non-fixed prep)	Sanson Lab: Sanson Lab		whole organism ubiquitous
first instar larval stage	larval muscle system (Live or non-fixed prep)	Brown lab: Sven Huelsmann		first instar larva ubiquitous cytoplasm
third instar larval stage	whole organism (Live or non-fixed prep)	Roberts Lab: Roger Guy Phillips		antennal disc eye disc larval ventral ganglion larval brain ventral thoracic disc dorsal mesothoracic disc dorsal metathoracic disc larval salivary gland
third instar larval stage	larval circulatory system (Live or non-fixed prep)	Ilan Davis lab: Ana Maria Valles		larval circulatory system cell cytoplasm
third instar larval stage	larval central nervous system (Live or non-fixed prep)	Brand Lab: Andrea Brand		larval central nervous system ubiquitous cytoplasm
third instar larval stage	larval salivary gland (Live or non-fixed prep)	Cambridge Genetics: Rob White		larval salivary gland cytoplasm
adult stage	male reproductive system (Live or non-fixed prep)	White-Cooper Lab: Helen White-Cooper		primary spermatocyte mitochondrion onion stage spermatid Nebenkern secondary spermatocyte
adult stage	adult brain (Fixed tissue prep)	Armstrong Lab: Seymour Knowles-Barley		cerebral cortex
adult stage	reproductive system (Live or non-fixed prep)	St Johnston Lab: kate and Dima		follicle cell cytoplasm nurse cell cytoplasm
adult stage	whole organism (Live or non-fixed prep)	Stanewsky Lab: Ralf Stanewsky
late embryonic stage	whole organism (Live or non-fixed prep)	Sanson Lab: Sanson Lab		whole organism ubiquitous

No expression reports

Stage	Tissue type	Annotator
third instar larval stage	whole organism (Live or non-fixed prep)	Alex Gould
adult stage	whole organism (Live or non-fixed prep)	Hanneke Okkenhaug
adult stage	female reproductive system (Live or non-fixed prep)	Becky and Vitor

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