Drosophila
gene expression annotation
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Stock report for CPTI-002560
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Stock report
Element name:
CPTI-002560
Derived from:
none
Line ID:
1
Donor:
754-3F2 (Males)
Construct:
PIGP3{FSVS-0}
Lethality:
viable
YFP expression?
Yes
Balancer:
SM6a
Chromosome:
2
Eye colour:
pale yellow
COPAS exp no.
315
COPAS plate
1:A2
Sent?
Yes (batch 10)
Stock status?
Kept
Seq plate:
155
Notes:
Sequencing Information
Scaffold:
12744206
Map location:
53D14
Chromosome:
2R
End mapped:
5
Element orientation:
minus
YFP orientation:
plus
Gene insertions
Gene ID
Gene Name
Start
Stop
Strand
Chr
GO Terms
Links
CG5935
Dek
12743726
12747861
1
2R
info
Transcript and frame information
Transcript ID
Feature
Feature ID
Correct orient?
In a UTR?
Correct frame?
CG5935-RA
intron
intron_CG5935:11_CG5935:12
Yes
No
Yes
CG5935-RB
exon
CG5935:1
CG5935-RB
5_UTR
five_prime_UTR_CG5935:1_576
CG5935-RC
intron
intron_CG5935:22_CG5935:12
Yes
No
Yes
CG5935-RD
intron
intron_CG5935:11_CG5935:12
Yes
No
Yes
Interaction data
2
26
0
STREPII
FLAG
•
•
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All annotation data
Expression reports
Stage
Tissue type
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Annotation
embryonic stage 5
whole organism
(Live or non-fixed prep)
Sanson Lab: Sanson Lab
whole organism
nucleus
embryonic stage 11
whole organism
(Live or non-fixed prep)
Sanson Lab: Sanson Lab
whole organism
ubiquitous
first instar larval stage
larval muscle system
(Live or non-fixed prep)
Brown lab: Sven Huelsmann
first instar larva
nucleus
ubiquitous
first instar larval stage
larval brain
(Live or non-fixed prep)
Landgraf Lab: Matthias Landgraf
larval brain
nucleus
ubiquitous
third instar larval stage
larval salivary gland
(Live or non-fixed prep)
Cambridge Genetics: Rob White
larval salivary gland
nucleus
chromosome
third instar larval stage
larval circulatory system
(Live or non-fixed prep)
Ilan Davis lab: Ana Maria Valles
larval circulatory system
cell
cytoplasm
central
uniform
adult stage
male reproductive system
(Live or non-fixed prep)
White-Cooper Lab: Helen White-Cooper
ejaculatory duct
nucleus
male accessory gland
nucleus
seminal vesicle
nucleus
primary spermatocyte
nucleus
chromosome
spermatogonium
nucleus
testis sheath muscle
nucleus
testis pigment cell
nucleus
cyst cell
nucleus
hub cell
nucleus
male germline stem cell
nucleus
cyst progenitor cell
nucleus
NOT
spermatid
adult stage
adult brain
(Fixed tissue prep)
Armstrong Lab: Seymour Knowles-Barley
cerebral cortex
adult stage
reproductive system
(Live or non-fixed prep)
St Johnston Lab: kate and Dima
egg chamber
nucleus
stage S9 oocyte
plasma membrane
lateral
stage S10 oocyte
plasma membrane
lateral
nurse cell
nucleus
granular
adult stage
female reproductive system
(Live or non-fixed prep)
St Johnston Lab: Becky and Vitor
egg chamber
nucleus
uniform
germarium
nucleus
uniform
adult stage
whole organism
(Live or non-fixed prep)
Kyriacou & Rosato Labs: Renata Azevedo & Celia Hansen
whole organism
late embryonic stage
whole organism
(Live or non-fixed prep)
Sanson Lab: Sanson Lab
whole organism
ubiquitous
No expression reports
Stage
Tissue type
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